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<?xml version="1.0" standalone="yes"?> <Paper uid="W06-1635"> <Title>Sydney, July 2006. c(c)2006 Association for Computational Linguistics Protein folding and chart parsing</Title> <Section position="2" start_page="0" end_page="0" type="abstr"> <SectionTitle> Abstract </SectionTitle> <Paragraph position="0"> How can proteins fold so quickly into their unique native structures? We show here that there is a natural analogy between parsing and the protein folding problem, and demonstrate that CKY can find the native structures of a simplified lattice model of proteins with high accuracy.</Paragraph> </Section> class="xml-element"></Paper>