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<Paper uid="W02-0302">
  <Title>Tagging Gene and Protein Names in Full Text Articles</Title>
  <Section position="1" start_page="0" end_page="0" type="abstr">
    <SectionTitle>
Abstract
</SectionTitle>
    <Paragraph position="0"> Current information extraction efforts in the biomedical domain tend to focus on finding entities and facts in structured databases or MEDLINE abstracts. We apply a gene and protein name tagger trained on Medline abstracts (ABGene) to a randomly selected set of full text journal articles in the biomedical domain. We show the effect of adaptations made in response to the greater heterogeneity of full text.</Paragraph>
  </Section>
class="xml-element"></Paper>